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Article: The origins of crown group birds: molecules and fossils

Publication: Palaeontology
Volume: 57
Part: 2
Publication Date: March 2014
Page(s): 231 – 242
Author(s): <p>Gerald Mayr</p>
Addition Information

How to Cite

MAYR, G. 2014. The origins of crown group birds: molecules and fossils. Palaeontology, 57, 2, 231–242. doi: 10.1111/pala.12103

Author Information

  • Gerald Mayr - Ornithological Section, Senckenberg Research Institute and Natural History Museum Frankfurt, Frankfurt am Main, Germany (email: gerald.mayr@senckenberg.de)

Publication History

  • Issue published online: 15 MAR 2014
  • Article first published online: 15 MAR 2014
  • Manuscript Accepted: 28 JAN 2014
  • Manuscript Received: 2 JAN 2014

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References

  • Aggerbeck, M., Fjeldså, J., Christidis, L., Fabre, P. H. and Jønsson, K. A. 2014. Resolving deep lineage divergences in core corvoid passerine birds supports a proto-Papuan island origin. Molecular Phylogenetics and Evolution, 70, 272–285.
  • Ballmann, P. 1969. Die Vögel aus der altburdigalen Spaltenfüllung von Wintershof (West) bei Eichsttt in Bayern. Zitteliana, 1, 5–60.
  • Beddard, F. E. 1898. The structure and classification of birds. Green and Co., London, Longmans, 368 pp.
  • Benton, M. J. 1999. Early origins of modern birds and mammals: molecules vs. morphology. BioEssays, 21, 1043–1051.
  • Berman, S. L. and Raikow, R. J. 1982. The hindlimb musculature of the mousebirds (Coliiformes). The Auk, 99, 41–57.
  • Bourdon, E., Bouya, B. and Iarochène, M. 2005. Earliest African neornithine bird: a new species of Prophaethontidae (Aves) from the Paleocene of Morocco. Journal of Vertebrate Paleontology, 25, 157–170.
  • Bourdon, E., Mourer-Chauviré, C., Amaghzaz, M. and Bouya, B. 2008. New specimens of Lithoptila abdounensis (Aves, Prophaethontidae) from the lower Paleogene of Morocco. Journal of Vertebrate Paleontology, 28, 751–761.
  • Braun, E. L., Kimball, R. T., Han, K. L., Iuhasz-Velez, N. R., Bonilla, A. J., Chojnowski, J. L., Smith, J. V., Bowie, R. C. K., Braun, M. J., Hackett, S. J., Harshman, J., Huddleston, C. J., Marks, B. D., Miglia, K. J., Moore, W. S., Reddy, S., Sheldon, F. H., Witt, C. C. and Yuri, T. 2011. Homoplastic microinversions and the avian tree of life. BMC Evolutionary Biology, 11, 141.
  • Brocklehurst, N., Upchurch, P., Mannion, P. D. and O'Connor, J. 2012. The completeness of the fossil record of Mesozoic birds: implications for early avian evolution. PLoS One, 7 (6), e39056.
  • Brown, J. W., Rest, J. S., Garcia-Moreno, J., Sorenson, M. D. and Mindell, D. P. 2008. Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages. BMC Biology, 6, 6.
  • Clarke, J. A. 2004. Morphology, phylogenetic taxonomy, and systematics of Ichthyornis and Apatornis (Avialae: Ornithurae). Bulletin of the American Museum of Natural History, 286, 1–179.
  • Clarke, J. A., Tambussi, C. P., Noriega, J. I., Erickson, G. M. and Ketcham, R. A. 2005. Definitive fossil evidence for the extant avian radiation in the Cretaceous. Nature, 433, 305–308.
  • Clarke, J. A., Ksepka, D. T., Smith, N. and Norell, M. A. 2009. Combined phylogenetic analysis of a new North American fossil species confirms widespread Eocene distribution for stem rollers (Aves, Coracii). Zoological Journal of the Linnean Society, 157, 586–611.
  • Cracraft, J., Barker, F. K., Braun, M., Harshman, J., Dyke, G. J., Feinstein, J., Stanley, S., Cibois, A., Schikler, P., Beresford, P., García-Moreno, J., Sorenson, M. D., Yuri, T. and Mindell, D. P. 2004. Phylogenetic relationships among modern birds (Neornithes): toward an avian tree of life. 468–489. In Cracraft, J. and Donoghue, M. (eds). Assembling the tree of life. Oxford University Press, New York, 576 pp.
  • Elzanowski, A. and Stidham, T. A. 2011. A galloanserine quadrate from the Late Cretaceous Lance Formation of Wyoming. The Auk, 128, 138–145.
  • Ericson, P. G. P. 2012. Evolution of terrestrial birds in three continents: biogeography and parallel radiations. Journal of Biogeography, 39, 813–824.
  • Ericson, P. G. P., Anderson, C. L., Britton, T., Elzanowski, A., Johansson, U. S., Kllersjö, M., Ohlson, J. I., Parsons, T. J., Zuccon, D. and Mayr, G. 2006. Diversification of Neoaves: integration of molecular sequence data and fossils. Biology Letters, 2, 543–547.
  • Espinosa de los Monteros, A. 2000. Higher-level phylogeny of Trogoniformes. Molecular Phylogenetics and Evolution, 14, 20–34.
  • Fain, M. G. and Houde, P. 2004. Parallel radiations in the primary clades of birds. Evolution, 58, 2558–2573.
  • Feduccia, A. 1995. Explosive evolution in Tertiary birds and mammals. Science, 267 (5198), 637–638.
  • Feduccia, A. 2003. ‘Big bang’ for tertiary birds? Trends in Ecology and Evolution, 18, 172–176.
  • Fjeldså, J. 2013. Avian classification in flux. 77–146. In Del Hoyo, J., Elliott, A., Sargatal, J. and Christie, D. A. (eds). Handbook of the birds of the World. Special Volume: new species and global index. Lynx Edicions, Barcelona, 812 pp.
  • Friis, E. M., Crane, P. R. and Pedersen, K. R. 2011. Early flowers and angiosperm evolution. Cambridge University Press, Cambridge, 585 pp.
  • Fürbringer, M. 1888. Untersuchungen zur Morphologie und Systematik der Vögel, zugleich ein Beitrag zur Anatomie der Stütz- und Bewegungsorgane, 2 volumes. van Holkema, Amsterdam, 1751 pp.
  • Hackett, S. J., Kimball, R. T., Reddy, S., Bowie, R. C. K., Braun, E. L., Braun, M. J., Chojnowski, J. L., Cox, W. A., Han, K.-L., Harshman, J., Huddleston, C. J., Marks, B. D., Miglia, K. J., Moore, W. S., Sheldon, F. H., Steadman, D. W., Witt, C. C. and Yuri, T. 2008. A phylogenomic study of birds reveals their evolutionary history. Science, 320, 1763–1767.
  • Han, K. L., Braun, E. L., Kimball, R. T., Reddy, S., Bowie, R. C. K., Braun, M. J., Chojnowski, J. L., Hackett, S. J., Harshman, J., Huddleston, C. J., Marks, B. D., Miglia, K. J., Moore, W. S., Sheldon, F. H., Steadman, D. W., Witt, C. C. and Yuri, T. 2011. Are transposable element insertions homoplasy free?: an examination using the avian tree of life. Systematic Biology, 60, 375–386.
  • Harrison, C. J. O. and Walker, C. A. 1976. A reappraisal of Prophaethon shrubsolei Andrews (Aves). Bulletin of the British Museum (Natural History), 27, 1–30.
  • Hope, S. 2002. The Mesozoic radiation of Neornithes. 339–388. In Chiappe, L. M. and Witmer, L. M. (eds). Mesozoic birds: above the heads of dinosaurs. University of California Press, Berkeley, 520 pp.
  • Kimball, R. T., Wang, N., Heimer-McGinn, V., Ferguson, C. and Braun, E. L. 2013. Identifying localized biases in large datasets: a case study using the avian tree of life. Molecular Phylogenetics and Evolution, 69, 1021–1032.
  • Ksepka, D. T. and Boyd, C. A. 2012. Quantifying historical trends in the completeness of the fossil record and the contributing factors: an example using Aves. Paleobiology, 38, 112–125.
  • Ksepka, D. T. and Clarke, J. A. 2012. A new stem parrot from the Green River Formation and the complex evolution of the grasping foot in Pan-Psittaciformes. Journal of Vertebrate Paleontology, 32, 395–406.
  • Ksepka, D. T., Clarke, J. A. and Grande, L. 2011. Stem parrots (Aves, Halcyornithidae) from the Green River Formation and a combined phylogeny of Pan-Psittaciformes. Journal of Paleontology, 85, 835–852.
  • Livezey, B. C. and Zusi, R. L. 2007. Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion. Zoological Journal of the Linnean Society, 149, 1–95.
  • Longrich, N. R., Tokaryk, T. and Field, D. J. 2011. Mass extinction of birds at the Cretaceous-Paleogene (K-Pg) boundary. Proceedings of the National Academy of Sciences of the United States of America, 108, 15253–15257.
  • Louchart, A., Tourment, N. and Carrier, J. 2011. The earliest known pelican reveals 30 million years of evolutionary stasis in beak morphology. Journal of Ornithology, 152, 15–20.
  • Mayr, G. 2000. A new raptor-like bird from the Lower Eocene of North America and Europe. Senckenbergiana lethaea, 80, 59–65.
  • Mayr, G. 2002. On the osteology and phylogenetic affinities of the Pseudasturidae – Lower Eocene stem-group representatives of parrots (Aves, Psittaciformes). Zoological Journal of the Linnean Society, 136, 715–729.
  • Mayr, G. 2005. The postcranial osteology and phylogenetic position of the Middle Eocene Messelastur gratulator Peters, 1994 – a morphological link between owls (Strigiformes) and falconiform birds? Journal of Vertebrate Paleontology, 25, 635–645.
  • Mayr, G. 2008. Phylogenetic affinities of the enigmatic avian taxon Zygodactylus based on new material from the early Oligocene of France. Journal of Systematic Palaeontology, 6, 333–344.
  • Mayr, G. 2009. Paleogene fossil birds. Springer, Heidelberg, 262 pp.
  • Mayr, G. 2011a. Metaves, Mirandornithes, Strisores, and other novelties – a critical review of the higher-level phylogeny of neornithine birds. Journal of Zoological Systematics and Evolutionary Research, 49, 58–76.
  • Mayr, G. 2011b. Well-preserved new skeleton of the Middle Eocene Messelastur substantiates sister group relationship between Messelasturidae and Halcyornithidae (Aves, ?Pan-Psittaciformes). Journal of Systematic Palaeontology, 9, 159–171.
  • Mayr, G.2011c. The phylogeny of charadriiform birds (shorebirds and allies) – reassessing the conflict between morphology and molecules. Zoological Journal of the Linnean Society, 161, 916–943.
  • Mayr, G. 2013. The age of the crown group of passerine birds and its evolutionary significance – molecular calibrations versus the fossil record. Systematics and Biodiversity, 11, 7–13.
  • Mayr, G. 2014. The Eocene Juncitarsus – its phylogenetic position and significance for the evolution and higher-level affinities of flamingos and grebes. Comptes Rendus Palevol, 13, 9–18.
  • Mayr, G. and Clarke, J. 2003. The deep divergences of neornithine birds: a phylogenetic analysis of morphological characters. Cladistics, 19, 527–553.
  • Mayr, G. and De Pietri, V. L. 2014. Earliest and first Northern Hemispheric hoatzin fossils substantiate Old World origin of a “Neotropic endemic”. Naturwissenschaften, published online January 2014, doi: 10.1007/s00114-014-1144-8.
  • Mayr, G., Zvonok, E. and Gorobets, L. 2013a. The tarsometatarsus of the middle Eocene loon Colymbiculus udovichenkoi. 17–22. In Göhlich, U. B. and Kroh, A. (eds). Paleornithological research 2013 – Proceedings of the 8th International Meeting of the Society of Avian Paleontology and Evolution. Natural History Museum Vienna, Vienna, 306 pp.
  • Mayr, G., Rana, R. S., Rose, K. D., Sahni, A., Kumar, K. and Smith, T. 2013b. New specimens of the early Eocene bird Vastanavis and the interrelationships of stem group Psittaciformes. Paleontological Journal, 47, 1308–1314.
  • McCormack, J. E., Harvey, M. G., Faircloth, B. C., Crawford, N. G., Glenn, T. C. and Brumfield, R. T. 2013. A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing. PLoS One, 8 (1), e54848.
  • Mourer-Chauviré, C., Tabuce, R., El Mabrouk, E., Marivaux, L., Khayati, H., Vianey-Liaud, M. and Ben Haj Ali, M. 2013. A new taxon of stem group Galliformes and the earliest record for stem group Cuculidae from the Eocene of Djebel Chambi, Tunisia. 1–15. In Göhlich, U. B. and Kroh, A. (eds). Paleornithological research 2013 – Proceedings of the 8th International Meeting of the Society of Avian Paleontology and Evolution. Natural History Museum Vienna, Vienna, 306 pp.
  • Myers, T. S. 2010. Earliest occurrence of the Pteranodontidae (Archosauria: Pterosauria) in North America: new material from the Austin Group of Texas. Journal of Paleontology, 84, 1071–1081.
  • Nahum, L. A., Pereira, S. L., Campos Fernandes, F. M. D., Russo Matioli, S. and Wajntal, A. 2003. Diversification of Ramphastinae (Aves, Ramphastidae) prior to the Cretaceous/Tertiary boundary as shown by molecular clock of mtDNA sequences. Genetics and Molecular Biology, 26, 411–418.
  • Nesbitt, S. J., Ksepka, D. T. and Clarke, J. A. 2011. Podargiform affinities of the enigmatic Fluvioviridavis platyrhamphus and the early diversification of Strisores (‘Caprimulgiformes’ + Apodiformes). PLoS One, 6 (11), e26350.
  • O'Connor, J. K., Chiappe, L. M. and Bell, A. 2011. Pre-modern birds: avian divergences in the Mesozoic. 39–114. In Dyke, G. and Kaiser, G. (eds). Living dinosaurs: the evolutionary history of modern birds. Wiley & Sons, Chichester, 440 pp.
  • Pacheco, M. A., Battistuzzi, F. U., Lentino, M., Aguilar, R. F., Kumar, S. and Escalante, A. A. 2011. Evolution of modern birds revealed by mitogenomics: timing the radiation and origin of major orders. Molecular Biology and Evolution, 28, 1927–1942.
  • Skoracki, M., Unsoeld, M. and Ozminski, M. 2013. A new genus of quill mites of the family Syringophilidae (Acari: Cheyletoidea) associated with mousebirds (Aves: Coliiformes). Systematic Parasitology, 85, 213–217.
  • Smith, N. D. 2010. Phylogenetic analysis of Pelecaniformes (Aves) based on osteological data: implications for waterbird phylogeny and fossil calibration studies. PLoS One, 5 (10), e13354.
  • Sorenson, M. D., Oneal, E., García-Moreno, J. and Mindell, D. P. 2003. More taxa, more characters: the hoatzin problem is still unresolved. Molecular Biology and Evolution, 20, 1484–1498.
  • Suh, A., Paus, M., Kiefmann, M., Churakov, G., Franke, F. A., Brosius, J., Kriegs, J. O. and Schmitz, J. 2011. Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds. Nature Communications, 2, 443.
  • Van Tuinen, M. 2009. Birds (Aves). 409–411. In Hedges, S. B. and Kumar, S. (eds). The timetree of life. Oxford University Press, New York, 551 pp.
  • Wang, N., Braun, E. L. and Kimball, R. T. 2012. Testing hypotheses about the sister group of the Passeriformes using an independent 30-locus data set. Molecular Biology and Evolution, 29, 737–750.
  • Wright, T. F., Schirtzinger, E. E., Matsumoto, T., Eberhard, J. R., Graves, G. R., Sanchez, J. J., Capelli, S., Müller, H., Scharpegge, J., Chambers, G. K. and Fleischer, R. C. 2008. A multilocus molecular phylogeny of the parrots (Psittaciformes): support for a Gondwanan origin during the Cretaceous. Molecular Biology and Evolution, 25, 2141–2156.
  • Yuri, T., Kimball, R. T., Harshman, J., Bowie, R. C. K., Braun, M. J., Chojnowski, J. L., Han, K.-L., Hackett, S. J., Huddleston, C.-J., Moore, W.-S., Reddy, S., Sheldon, F. H., Steadman, D. W., Witt, C. C. and Braun, E. L. 2013. Parsimony and model-based analyses of indels in avian nuclear genes reveal congruent and incongruent phylogenetic signals. Biology, 2, 419–444.
  • Zusi, R. L. and Warheit, K. I. 1992. On the evolution of intraramal mandibular joints in pseudodontorns (Aves: Odontopterygia). 351–360. In Campbell, K. E. (ed.). Papers in avian paleontology honoring Pierce Brodkorb, Science Series, 36. Natural History Museum of Los Angeles County, 491 pp.
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